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OCTOBER 2013: A*OnePortal NEXT GENERATION SCIENTIFIC PORTAL

Novaglobal announces the immediate availability of the A*OnePortal Scientific Gateway Portal designed for easy access to Grid computing infrastructures and High Performance Computing Clusters (HPCC). The next generation portal is generic and is able to host many different scientific applications. The first product launched by Novaglobal is a Computational Chemistry & Biology Suite comprising of Autodock4, AMBER, NWChem, GROMACS and others.

Development on the portal is accomplished using gUSE/WS-PGRADE which is a web-based generic purpose and workflow-oriented framework. The framework helps to accelerate application portlet development and is also able to address complex simulation workflow scenarios.

SEPTEMBER 2013: Integrated Rule-Oriented Data-management System (iRODS)

iRODS is a community-driven, open source, data grid software solution. It helps researchers, archivists and others to manage (organize, share, protect, and preserve) large sets of computer files. Collections can range in size from moderate to a hundred million files or more, totaling to petabytes of data.

AUGUST 2013: BIOSCIENCE HPCC FOR SECONDARY ANALYSIS

NovaGlobal had provided consultation and successfully built a Bioscience HPCC (High Performance Computing Cluster) for a local research institute that focuses primarily on understanding cellular mechanisms that underlie the development and physiology of plants, fungi and animals

The system comprises primarily of IBM large memory SMPs, IBM Storage and more than 50 Open Source applications. One of the key applications that have successfully been integrated to the HPC cluster is the CLC Genomics Server. Analyses are done from the CLC Genomics Workbench client installed at the workstation and connected to the CLC Genomics Server on the cluster, utilizing the cluster ... read more

JUNE 2013: GRID-ENABLED BioPortal

The Centre for Information and Communication Technology – Universiti Teknologi Malaysia has provided us the resources to access the Malaysia Research and Education Network through the generic-purpose science gateway portal developed from the SCI-BUS project.

Some details are as follows:

Portal homepage: http://scibus.cict.utm.my
Portal Framework: WS-PGRADE/gUSE version 3.5.5
Programming API: ASM 3.4
Operating System: Scientific Linux 6.2
Grid Middleware: EMI Middleware UI version 2.0
Applications: Autodock4, AMBER, NWChem, GROMACS, FastDNAml, Phase, Clustalw-MPI, BLAST, Muscle, OpenFOAM, Blender, Multidendrograms, PROSPECT, NAMD, Glimmer

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